Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smim1P0C8K7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Smim1P0C8K7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.55□□□□□ -0.88
Smim1P0C8K7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 AC153794.1-201ENSMUST00000169148 126 ntBASIC9.55□□□□□ -0.88
Smim1P0C8K7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC9.55□□□□□ -0.88
Smim1P0C8K7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Smim1P0C8K7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC9.54□□□□□ -0.88
Smim1P0C8K7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smim1P0C8K7 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.53□□□□□ -0.88
Smim1P0C8K7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Smim1P0C8K7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms