Protein–RNA interactions for Protein: P09632

Hoxb8, Homeobox protein Hox-B8, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb8P09632 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxb8P09632 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.85□□□□□ -0.03
Hoxb8P09632 Gm27892-201ENSMUST00000185017 106 ntBASIC14.85□□□□□ -0.03
Hoxb8P09632 Mir7654-201ENSMUST00000185082 70 ntBASIC14.85□□□□□ -0.03
Hoxb8P09632 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxb8P09632 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxb8P09632 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxb8P09632 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Hoxb8P09632 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Hoxb8P09632 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.85□□□□□ -0.03
Hoxb8P09632 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hoxb8P09632 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hoxb8P09632 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hoxb8P09632 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hoxb8P09632 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.84□□□□□ -0.03
Hoxb8P09632 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Gm12742-201ENSMUST00000117326 410 ntBASIC14.84□□□□□ -0.03
Hoxb8P09632 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Mir1982-201ENSMUST00000157368 74 ntBASIC14.84□□□□□ -0.03
Hoxb8P09632 Mir6420-201ENSMUST00000185032 102 ntBASIC14.84□□□□□ -0.03
Hoxb8P09632 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.84□□□□□ -0.03
Hoxb8P09632 Gm17794-201ENSMUST00000220252 955 ntBASIC14.84□□□□□ -0.03
Hoxb8P09632 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.84□□□□□ -0.03
Hoxb8P09632 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Gm5356-201ENSMUST00000093326 615 ntBASIC14.84□□□□□ -0.03
Hoxb8P09632 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.84□□□□□ -0.03
Hoxb8P09632 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hoxb8P09632 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxb8P09632 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxb8P09632 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Hoxb8P09632 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxb8P09632 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxb8P09632 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.83□□□□□ -0.03
Hoxb8P09632 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
Hoxb8P09632 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxb8P09632 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxb8P09632 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxb8P09632 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.83□□□□□ -0.03
Hoxb8P09632 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.83□□□□□ -0.04
Hoxb8P09632 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.83□□□□□ -0.04
Hoxb8P09632 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.83□□□□□ -0.04
Hoxb8P09632 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.83□□□□□ -0.04
Hoxb8P09632 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.83□□□□□ -0.04
Hoxb8P09632 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxb8P09632 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxb8P09632 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxb8P09632 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxb8P09632 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxb8P09632 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxb8P09632 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxb8P09632 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxb8P09632 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxb8P09632 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms