Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Hoxa4P06798 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.71□□□□□ -0.22
Hoxa4P06798 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxa4P06798 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxa4P06798 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hoxa4P06798 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hoxa4P06798 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.7□□□□□ -0.22
Hoxa4P06798 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Hoxa4P06798 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Hoxa4P06798 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.7□□□□□ -0.22
Hoxa4P06798 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxa4P06798 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hoxa4P06798 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.7□□□□□ -0.22
Hoxa4P06798 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hoxa4P06798 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hoxa4P06798 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
Hoxa4P06798 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Rubie-203ENSMUST00000227803 2430 ntBASIC13.7□□□□□ -0.22
Hoxa4P06798 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxa4P06798 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.69□□□□□ -0.22
Hoxa4P06798 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Hoxa4P06798 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.69□□□□□ -0.22
Hoxa4P06798 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.69□□□□□ -0.22
Hoxa4P06798 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hoxa4P06798 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hoxa4P06798 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.69□□□□□ -0.22
Hoxa4P06798 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Hoxa4P06798 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
Hoxa4P06798 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.69□□□□□ -0.22
Hoxa4P06798 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxa4P06798 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hoxa4P06798 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxa4P06798 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxa4P06798 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxa4P06798 Gm19078-201ENSMUST00000206311 727 ntBASIC13.68□□□□□ -0.22
Hoxa4P06798 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.68□□□□□ -0.22
Hoxa4P06798 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Gm24447-201ENSMUST00000083977 338 ntBASIC13.68□□□□□ -0.22
Hoxa4P06798 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hoxa4P06798 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxa4P06798 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms