Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.3□□□□□ -0.6
P06323 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06323 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06323 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P06323 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06323 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.29□□□□□ -0.6
P06323 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
P06323 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.29□□□□□ -0.6
P06323 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.29□□□□□ -0.6
P06323 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.29□□□□□ -0.6
P06323 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
P06323 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
P06323 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.29□□□□□ -0.6
P06323 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.29□□□□□ -0.6
P06323 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P06323 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.28□□□□□ -0.6
P06323 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P06323 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
P06323 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
P06323 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
P06323 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.28□□□□□ -0.6
P06323 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.28□□□□□ -0.6
P06323 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
P06323 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.28□□□□□ -0.6
P06323 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
P06323 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
P06323 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.28□□□□□ -0.6
P06323 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.28□□□□□ -0.6
P06323 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
P06323 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
P06323 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
P06323 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06323 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06323 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06323 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06323 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
P06323 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
P06323 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06323 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06323 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06323 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
P06323 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.27□□□□□ -0.61
P06323 Gm15467-201ENSMUST00000120582 445 ntBASIC11.27□□□□□ -0.61
P06323 Gm12882-201ENSMUST00000121696 517 ntBASIC11.27□□□□□ -0.61
P06323 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms