Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CopeO89079 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CopeO89079 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.37□□□□□ -0.11
CopeO89079 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.37□□□□□ -0.11
CopeO89079 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.37□□□□□ -0.11
CopeO89079 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.37□□□□□ -0.11
CopeO89079 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CopeO89079 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CopeO89079 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.37□□□□□ -0.11
CopeO89079 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CopeO89079 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.36□□□□□ -0.11
CopeO89079 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CopeO89079 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.36□□□□□ -0.11
CopeO89079 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.36□□□□□ -0.11
CopeO89079 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CopeO89079 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CopeO89079 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.36□□□□□ -0.11
CopeO89079 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Gm15427-201ENSMUST00000117288 531 ntBASIC14.36□□□□□ -0.11
CopeO89079 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.36□□□□□ -0.11
CopeO89079 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.36□□□□□ -0.11
CopeO89079 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.36□□□□□ -0.11
CopeO89079 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.36□□□□□ -0.11
CopeO89079 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CopeO89079 Gm18737-201ENSMUST00000173594 937 ntBASIC14.36□□□□□ -0.11
CopeO89079 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.36□□□□□ -0.11
CopeO89079 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.36□□□□□ -0.11
CopeO89079 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.36□□□□□ -0.11
CopeO89079 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CopeO89079 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.36□□□□□ -0.11
CopeO89079 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CopeO89079 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CopeO89079 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CopeO89079 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.35□□□□□ -0.11
CopeO89079 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.35□□□□□ -0.11
CopeO89079 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.35□□□□□ -0.11
CopeO89079 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.35□□□□□ -0.11
CopeO89079 Psmb5-202ENSMUST00000227257 622 ntBASIC14.35□□□□□ -0.11
CopeO89079 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.35□□□□□ -0.11
CopeO89079 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.35□□□□□ -0.11
CopeO89079 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.35□□□□□ -0.11
CopeO89079 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CopeO89079 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CopeO89079 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CopeO89079 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CopeO89079 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CopeO89079 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CopeO89079 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.34□□□□□ -0.11
CopeO89079 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms