Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm37230-201ENSMUST00000194491 818 ntBASIC13.67□□□□□ -0.22
ClppO88696 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.67□□□□□ -0.22
ClppO88696 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ClppO88696 Gm46209-201ENSMUST00000217912 553 ntBASIC13.67□□□□□ -0.22
ClppO88696 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ClppO88696 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.67□□□□□ -0.22
ClppO88696 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClppO88696 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ClppO88696 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ClppO88696 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ClppO88696 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.66□□□□□ -0.22
ClppO88696 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ClppO88696 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.66□□□□□ -0.22
ClppO88696 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
ClppO88696 Gm15321-201ENSMUST00000121290 288 ntBASIC13.66□□□□□ -0.22
ClppO88696 Mir1897-201ENSMUST00000122581 272 ntBASIC13.66□□□□□ -0.22
ClppO88696 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.66□□□□□ -0.22
ClppO88696 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Gm5745-201ENSMUST00000183748 313 ntBASIC13.66□□□□□ -0.22
ClppO88696 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.66□□□□□ -0.22
ClppO88696 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.66□□□□□ -0.22
ClppO88696 Gm9229-201ENSMUST00000222777 126 ntBASIC13.66□□□□□ -0.22
ClppO88696 Gm2423-201ENSMUST00000074863 733 ntBASIC13.66□□□□□ -0.22
ClppO88696 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.66□□□□□ -0.22
ClppO88696 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.66□□□□□ -0.22
ClppO88696 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ClppO88696 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
ClppO88696 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ClppO88696 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ClppO88696 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.66□□□□□ -0.22
ClppO88696 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.65□□□□□ -0.22
ClppO88696 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
ClppO88696 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ClppO88696 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
ClppO88696 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ClppO88696 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.65□□□□□ -0.22
ClppO88696 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ClppO88696 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.65□□□□□ -0.22
ClppO88696 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.65□□□□□ -0.22
ClppO88696 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.65□□□□□ -0.22
ClppO88696 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ClppO88696 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.65□□□□□ -0.22
ClppO88696 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Syt7-205ENSMUST00000224135 1557 ntBASIC13.65□□□□□ -0.22
ClppO88696 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ClppO88696 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ClppO88696 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms