Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Mir6392-201ENSMUST00000184924 108 ntBASIC17.36■□□□□ 0.37
Cfdp1O88271 Gm19220-201ENSMUST00000222682 803 ntBASIC17.36■□□□□ 0.37
Cfdp1O88271 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.36■□□□□ 0.37
Cfdp1O88271 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfdp1O88271 Gm6180-201ENSMUST00000065243 498 ntBASIC17.36■□□□□ 0.37
Cfdp1O88271 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cfdp1O88271 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfdp1O88271 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfdp1O88271 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.36■□□□□ 0.37
Cfdp1O88271 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC17.36■□□□□ 0.37
Cfdp1O88271 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfdp1O88271 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfdp1O88271 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfdp1O88271 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cfdp1O88271 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfdp1O88271 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfdp1O88271 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cfdp1O88271 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Gm3809-201ENSMUST00000180973 1006 ntBASIC17.35■□□□□ 0.37
Cfdp1O88271 Gm5745-201ENSMUST00000183748 313 ntBASIC17.35■□□□□ 0.37
Cfdp1O88271 Gm18018-201ENSMUST00000198273 408 ntBASIC17.35■□□□□ 0.37
Cfdp1O88271 Gm9794-201ENSMUST00000202370 423 ntBASIC17.35■□□□□ 0.37
Cfdp1O88271 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cfdp1O88271 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.35■□□□□ 0.37
Cfdp1O88271 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cfdp1O88271 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cfdp1O88271 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cfdp1O88271 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cfdp1O88271 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cfdp1O88271 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.34■□□□□ 0.37
Cfdp1O88271 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfdp1O88271 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.34■□□□□ 0.37
Cfdp1O88271 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cfdp1O88271 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.34■□□□□ 0.37
Cfdp1O88271 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Cfdp1O88271 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cfdp1O88271 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.34■□□□□ 0.37
Cfdp1O88271 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Cfdp1O88271 Gm6745-201ENSMUST00000199216 526 ntBASIC17.34■□□□□ 0.37
Cfdp1O88271 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfdp1O88271 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfdp1O88271 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfdp1O88271 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.34■□□□□ 0.37
Cfdp1O88271 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfdp1O88271 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cfdp1O88271 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfdp1O88271 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfdp1O88271 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cfdp1O88271 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.33■□□□□ 0.37
Cfdp1O88271 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfdp1O88271 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfdp1O88271 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfdp1O88271 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfdp1O88271 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Cfdp1O88271 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cfdp1O88271 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cfdp1O88271 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfdp1O88271 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cfdp1O88271 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Cfdp1O88271 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.33■□□□□ 0.36
Cfdp1O88271 Gm12091-201ENSMUST00000146791 830 ntBASIC17.33■□□□□ 0.36
Cfdp1O88271 Gm24420-201ENSMUST00000176676 59 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms