Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Gm5161-201ENSMUST00000075243 853 ntBASIC14.5□□□□□ -0.09
Ttc3O88196 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ttc3O88196 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.5□□□□□ -0.09
Ttc3O88196 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ttc3O88196 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ttc3O88196 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.49□□□□□ -0.09
Ttc3O88196 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ttc3O88196 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.49□□□□□ -0.09
Ttc3O88196 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ttc3O88196 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Gm12957-201ENSMUST00000117835 377 ntBASIC14.49□□□□□ -0.09
Ttc3O88196 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Gm45784-201ENSMUST00000188360 142 ntBASIC14.49□□□□□ -0.09
Ttc3O88196 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Ttc3O88196 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ttc3O88196 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Ttc3O88196 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ttc3O88196 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ttc3O88196 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Gm8810-201ENSMUST00000172895 754 ntBASIC14.48□□□□□ -0.09
Ttc3O88196 Proscos-202ENSMUST00000178990 666 ntBASIC14.48□□□□□ -0.09
Ttc3O88196 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.48□□□□□ -0.09
Ttc3O88196 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.48□□□□□ -0.09
Ttc3O88196 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.48□□□□□ -0.09
Ttc3O88196 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Gm6091-201ENSMUST00000098307 165 ntBASIC14.48□□□□□ -0.09
Ttc3O88196 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ttc3O88196 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.48□□□□□ -0.09
Ttc3O88196 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
Ttc3O88196 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ttc3O88196 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Ttc3O88196 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ttc3O88196 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ttc3O88196 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ttc3O88196 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.47□□□□□ -0.09
Ttc3O88196 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.47□□□□□ -0.09
Ttc3O88196 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.47□□□□□ -0.09
Ttc3O88196 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Gm13392-201ENSMUST00000117708 150 ntBASIC14.47□□□□□ -0.09
Ttc3O88196 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ttc3O88196 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms