Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ndufb11O09111 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ndufb11O09111 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Ndufb11O09111 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ndufb11O09111 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC11.11□□□□□ -0.63
Ndufb11O09111 Gm37856-201ENSMUST00000191634 999 ntBASIC11.11□□□□□ -0.63
Ndufb11O09111 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.11□□□□□ -0.63
Ndufb11O09111 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Ndufb11O09111 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.11□□□□□ -0.63
Ndufb11O09111 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ndufb11O09111 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.11□□□□□ -0.63
Ndufb11O09111 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ndufb11O09111 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ndufb11O09111 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Gm13836-201ENSMUST00000121159 501 ntBASIC11.1□□□□□ -0.63
Ndufb11O09111 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.1□□□□□ -0.63
Ndufb11O09111 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.1□□□□□ -0.63
Ndufb11O09111 AC127349.1-201ENSMUST00000224590 266 ntBASIC11.1□□□□□ -0.63
Ndufb11O09111 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Ndufb11O09111 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ndufb11O09111 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Ndufb11O09111 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.09□□□□□ -0.63
Ndufb11O09111 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ndufb11O09111 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ndufb11O09111 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ndufb11O09111 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.09□□□□□ -0.63
Ndufb11O09111 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms