Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Casp6O08738 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Casp6O08738 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.92□□□□□ -0.5
Casp6O08738 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.92□□□□□ -0.5
Casp6O08738 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Casp6O08738 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.92□□□□□ -0.5
Casp6O08738 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.92□□□□□ -0.5
Casp6O08738 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.92□□□□□ -0.5
Casp6O08738 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.92□□□□□ -0.5
Casp6O08738 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Gm45784-201ENSMUST00000188360 142 ntBASIC11.92□□□□□ -0.5
Casp6O08738 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Casp6O08738 Gm38671-201ENSMUST00000200573 130 ntBASIC11.92□□□□□ -0.5
Casp6O08738 Gm7287-201ENSMUST00000205267 602 ntBASIC11.92□□□□□ -0.5
Casp6O08738 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.92□□□□□ -0.5
Casp6O08738 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Casp6O08738 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.92□□□□□ -0.5
Casp6O08738 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.92□□□□□ -0.5
Casp6O08738 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Casp6O08738 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Casp6O08738 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Casp6O08738 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Casp6O08738 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.91□□□□□ -0.5
Casp6O08738 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.91□□□□□ -0.5
Casp6O08738 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Casp6O08738 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Casp6O08738 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Gm12485-201ENSMUST00000119641 291 ntBASIC11.91□□□□□ -0.5
Casp6O08738 Snora78-201ENSMUST00000158630 128 ntBASIC11.91□□□□□ -0.5
Casp6O08738 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.91□□□□□ -0.5
Casp6O08738 Gm17420-201ENSMUST00000164753 153 ntBASIC11.91□□□□□ -0.5
Casp6O08738 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Casp6O08738 Gm29649-201ENSMUST00000185649 419 ntBASIC11.91□□□□□ -0.5
Casp6O08738 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Casp6O08738 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.91□□□□□ -0.5
Casp6O08738 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.91□□□□□ -0.5
Casp6O08738 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.91□□□□□ -0.5
Casp6O08738 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Casp6O08738 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms