Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.71■□□□□ 0.27
NpcdF8VQB8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Gm8213-201ENSMUST00000118191 441 ntBASIC16.71■□□□□ 0.27
NpcdF8VQB8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.71■□□□□ 0.27
NpcdF8VQB8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Gm29705-201ENSMUST00000212598 474 ntBASIC16.71■□□□□ 0.27
NpcdF8VQB8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Gm9368-201ENSMUST00000219348 831 ntBASIC16.71■□□□□ 0.27
NpcdF8VQB8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NpcdF8VQB8 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.71■□□□□ 0.26
NpcdF8VQB8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
NpcdF8VQB8 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
NpcdF8VQB8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.7■□□□□ 0.26
NpcdF8VQB8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NpcdF8VQB8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Gm24420-201ENSMUST00000176676 59 ntBASIC16.7■□□□□ 0.26
NpcdF8VQB8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Gm18935-201ENSMUST00000212692 664 ntBASIC16.7■□□□□ 0.26
NpcdF8VQB8 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.7■□□□□ 0.26
NpcdF8VQB8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.7■□□□□ 0.26
NpcdF8VQB8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NpcdF8VQB8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.69■□□□□ 0.26
NpcdF8VQB8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Gm1335-201ENSMUST00000121653 386 ntBASIC16.69■□□□□ 0.26
NpcdF8VQB8 Gm10156-201ENSMUST00000122364 462 ntBASIC16.69■□□□□ 0.26
NpcdF8VQB8 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.69■□□□□ 0.26
NpcdF8VQB8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Gm44608-201ENSMUST00000206827 855 ntBASIC16.69■□□□□ 0.26
NpcdF8VQB8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.69■□□□□ 0.26
NpcdF8VQB8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NpcdF8VQB8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NpcdF8VQB8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms