Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh1F7BJK1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Gm6973-201ENSMUST00000117080 721 ntBASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Gm44771-201ENSMUST00000206975 626 ntBASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh1F7BJK1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh1F7BJK1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Gm9727-201ENSMUST00000161387 555 ntBASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdh1F7BJK1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms