Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.6□□□□□ -0.23
Col6a3E9PWQ3 Gm15036-201ENSMUST00000118880 400 ntBASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Gm9463-201ENSMUST00000206707 601 ntBASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Gm14034-201ENSMUST00000120147 551 ntBASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col6a3E9PWQ3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Col6a3E9PWQ3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col6a3E9PWQ3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col6a3E9PWQ3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col6a3E9PWQ3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Col6a3E9PWQ3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Col6a3E9PWQ3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Gm14274-201ENSMUST00000117182 615 ntBASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Col6a3E9PWQ3 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Gm11930-201ENSMUST00000117788 190 ntBASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Col6a3E9PWQ3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms