Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.99□□□□□ -0.01
Clca3bE9PUL3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clca3bE9PUL3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Clca3bE9PUL3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Clca3bE9PUL3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Clca3bE9PUL3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Gm12341-201ENSMUST00000119724 503 ntBASIC14.98□□□□□ -0.01
Clca3bE9PUL3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Gm6180-201ENSMUST00000065243 498 ntBASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Clca3bE9PUL3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Mir6392-201ENSMUST00000184924 108 ntBASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Gm19078-201ENSMUST00000206311 727 ntBASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Clca3bE9PUL3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Gm15376-201ENSMUST00000122258 783 ntBASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.96□□□□□ -0.01
Clca3bE9PUL3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clca3bE9PUL3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clca3bE9PUL3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clca3bE9PUL3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clca3bE9PUL3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Clca3bE9PUL3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.96□□□□□ -0.02
Clca3bE9PUL3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Clca3bE9PUL3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Clca3bE9PUL3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clca3bE9PUL3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clca3bE9PUL3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Clca3bE9PUL3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Clca3bE9PUL3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clca3bE9PUL3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Clca3bE9PUL3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms