Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim30cD3YVI9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Trim30cD3YVI9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim30cD3YVI9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim30cD3YVI9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim30cD3YVI9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim30cD3YVI9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trim30cD3YVI9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.27■□□□□ 0.03
Trim30cD3YVI9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim30cD3YVI9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trim30cD3YVI9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trim30cD3YVI9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trim30cD3YVI9 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trim30cD3YVI9 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Gm25287-201ENSMUST00000103846 110 ntBASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Gm22918-201ENSMUST00000103855 110 ntBASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Gm38225-201ENSMUST00000194001 393 ntBASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim30cD3YVI9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm22065-201ENSMUST00000103753 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm22066-201ENSMUST00000103761 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm24932-201ENSMUST00000103763 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm24115-201ENSMUST00000103799 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm22190-201ENSMUST00000103827 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm22191-201ENSMUST00000103831 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm24721-201ENSMUST00000103849 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm28018-201ENSMUST00000103869 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm26399-201ENSMUST00000103937 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm13464-201ENSMUST00000119418 935 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm25349-201ENSMUST00000177728 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm23616-201ENSMUST00000177797 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm25871-201ENSMUST00000177816 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm24752-201ENSMUST00000178240 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm24496-201ENSMUST00000178287 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm25649-201ENSMUST00000178476 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm25548-201ENSMUST00000178681 110 ntBASIC15.25■□□□□ 0.03
Trim30cD3YVI9 Gm23147-201ENSMUST00000178841 110 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 222.8 ms