Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrn3B2RS91 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrn3B2RS91 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrn3B2RS91 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rrn3B2RS91 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rrn3B2RS91 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rrn3B2RS91 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rrn3B2RS91 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.06□□□□□ -0.16
Rrn3B2RS91 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Gm15393-201ENSMUST00000120499 219 ntBASIC14.06□□□□□ -0.16
Rrn3B2RS91 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.06□□□□□ -0.16
Rrn3B2RS91 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rrn3B2RS91 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Gm12585-201ENSMUST00000117307 290 ntBASIC14.05□□□□□ -0.16
Rrn3B2RS91 Gm12151-201ENSMUST00000121374 290 ntBASIC14.05□□□□□ -0.16
Rrn3B2RS91 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Gm5425-201ENSMUST00000214125 459 ntBASIC14.05□□□□□ -0.16
Rrn3B2RS91 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.05□□□□□ -0.16
Rrn3B2RS91 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rrn3B2RS91 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rrn3B2RS91 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.04□□□□□ -0.16
Rrn3B2RS91 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.04□□□□□ -0.16
Rrn3B2RS91 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Mir6977-201ENSMUST00000184960 64 ntBASIC14.04□□□□□ -0.16
Rrn3B2RS91 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rrn3B2RS91 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms