Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tubb1A2AQ07 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Gm2756-201ENSMUST00000195851 400 ntBASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Gm7774-201ENSMUST00000200064 533 ntBASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tubb1A2AQ07 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tubb1A2AQ07 Gm23935-201ENSMUST00000102303 57 ntBASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Gm24270-201ENSMUST00000102326 57 ntBASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Mir1897-201ENSMUST00000122581 272 ntBASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Gm24245-201ENSMUST00000157318 57 ntBASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Gm27702-201ENSMUST00000184512 56 ntBASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Gm29741-201ENSMUST00000192667 421 ntBASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.27□□□□□ -0.13
Tubb1A2AQ07 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tubb1A2AQ07 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tubb1A2AQ07 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms