Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Gm13823-201ENSMUST00000119930 345 ntBASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc194A0A140LIT1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Gm18889-201ENSMUST00000174284 929 ntBASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Gm9824-201ENSMUST00000178707 561 ntBASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc194A0A140LIT1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Ccdc194A0A140LIT1 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccdc194A0A140LIT1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ccdc194A0A140LIT1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccdc194A0A140LIT1 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms