Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.72□□□□□ -0.69
PdfS4R2K0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.72□□□□□ -0.69
PdfS4R2K0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.72□□□□□ -0.69
PdfS4R2K0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
PdfS4R2K0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
PdfS4R2K0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
PdfS4R2K0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
PdfS4R2K0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.71□□□□□ -0.69
PdfS4R2K0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC10.71□□□□□ -0.69
PdfS4R2K0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC10.71□□□□□ -0.69
PdfS4R2K0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
PdfS4R2K0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.71□□□□□ -0.69
PdfS4R2K0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.71□□□□□ -0.69
PdfS4R2K0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.71□□□□□ -0.69
PdfS4R2K0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.71□□□□□ -0.69
PdfS4R2K0 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.71□□□□□ -0.69
PdfS4R2K0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.71□□□□□ -0.69
PdfS4R2K0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
PdfS4R2K0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.71□□□□□ -0.69
PdfS4R2K0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
PdfS4R2K0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.7
PdfS4R2K0 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.71□□□□□ -0.7
PdfS4R2K0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
PdfS4R2K0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
PdfS4R2K0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
PdfS4R2K0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
PdfS4R2K0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
PdfS4R2K0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
PdfS4R2K0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
PdfS4R2K0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
PdfS4R2K0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.7□□□□□ -0.7
PdfS4R2K0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
PdfS4R2K0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms