Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Scn8aQ9WTU3 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn8aQ9WTU3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Gm28911-201ENSMUST00000188837 117 ntBASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Sybu-209ENSMUST00000228639 4113 ntBASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scn8aQ9WTU3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scn8aQ9WTU3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scn8aQ9WTU3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms