Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Mir8117-201ENSMUST00000184773 107 ntBASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chaf1aQ9QWF0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Gm11025-201ENSMUST00000140773 466 ntBASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Chaf1aQ9QWF0 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Gm10175-201ENSMUST00000086013 645 ntBASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.63■□□□□ 0.09
Chaf1aQ9QWF0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Chaf1aQ9QWF0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms