Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sec61a2Q9JLR1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Gm25287-201ENSMUST00000103846 110 ntBASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Gm22918-201ENSMUST00000103855 110 ntBASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sec61a2Q9JLR1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Gm24158-201ENSMUST00000175263 71 ntBASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.59□□□□□ -0.39
Sec61a2Q9JLR1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sec61a2Q9JLR1 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sec61a2Q9JLR1 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.58□□□□□ -0.39
Sec61a2Q9JLR1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sec61a2Q9JLR1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Sec61a2Q9JLR1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sec61a2Q9JLR1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sec61a2Q9JLR1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sec61a2Q9JLR1 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms