Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl28Q9JIL2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl28Q9JIL2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl28Q9JIL2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl28Q9JIL2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccl28Q9JIL2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl28Q9JIL2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl28Q9JIL2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccl28Q9JIL2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm18737-201ENSMUST00000173594 937 ntBASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm18057-201ENSMUST00000208220 503 ntBASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl28Q9JIL2 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl28Q9JIL2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Gm2810-201ENSMUST00000118681 990 ntBASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Gm38225-201ENSMUST00000194001 393 ntBASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Gm43514-201ENSMUST00000198852 424 ntBASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl28Q9JIL2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms