Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Gm2451-201ENSMUST00000199447 999 ntBASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Gm10290-201ENSMUST00000200451 999 ntBASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ClpxQ9JHS4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Gm13597-201ENSMUST00000121239 375 ntBASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Gm14822-201ENSMUST00000122247 291 ntBASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Gm5177-201ENSMUST00000183092 997 ntBASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Gm27702-201ENSMUST00000184512 56 ntBASIC12.79□□□□□ -0.36
ClpxQ9JHS4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Gm44492-201ENSMUST00000197012 141 ntBASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Gm9182-201ENSMUST00000217829 639 ntBASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Gm18041-201ENSMUST00000218210 618 ntBASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ClpxQ9JHS4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClpxQ9JHS4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClpxQ9JHS4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ClpxQ9JHS4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClpxQ9JHS4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.78□□□□□ -0.36
ClpxQ9JHS4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ClpxQ9JHS4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ClpxQ9JHS4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ClpxQ9JHS4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms