Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-4Q9EQM3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Gm22323-201ENSMUST00000103832 109 ntBASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Gm5687-201ENSMUST00000118252 640 ntBASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Gm6082-201ENSMUST00000215204 454 ntBASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-4Q9EQM3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Gm24255-201ENSMUST00000104481 128 ntBASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Gm15370-201ENSMUST00000117158 253 ntBASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Gm43138-201ENSMUST00000199123 708 ntBASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Gm5363-201ENSMUST00000211927 938 ntBASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.23□□□□□ -0.13
Nkx2-4Q9EQM3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nkx2-4Q9EQM3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms