Protein–RNA interactions for Protein: Q9DCK3

Tspan4, Tetraspanin-4, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan4Q9DCK3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Gm10060-201ENSMUST00000212002 111 ntBASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Gm18622-201ENSMUST00000219361 595 ntBASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.81□□□□□ -0.52
Tspan4Q9DCK3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Gm7230-201ENSMUST00000173026 815 ntBASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Tspan4Q9DCK3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Gm8344-201ENSMUST00000119813 856 ntBASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Gm11780-201ENSMUST00000136880 516 ntBASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Gm44771-201ENSMUST00000206975 626 ntBASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.79□□□□□ -0.52
Tspan4Q9DCK3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms