Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Mir449b-201ENSMUST00000104833 80 ntBASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Gm24158-201ENSMUST00000175263 71 ntBASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Gm2445-201ENSMUST00000182798 989 ntBASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Gm7774-201ENSMUST00000200064 533 ntBASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Shd-206ENSMUST00000225145 998 ntBASIC14.57□□□□□ -0.08
Cpne8Q9DC53 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Mir497b-201ENSMUST00000093601 125 ntBASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.57□□□□□ -0.08
Cpne8Q9DC53 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Gm37714-201ENSMUST00000194742 342 ntBASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.56□□□□□ -0.08
Cpne8Q9DC53 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Gm18027-201ENSMUST00000218947 619 ntBASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Cpne8Q9DC53 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cpne8Q9DC53 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms