Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Gm45747-201ENSMUST00000212203 999 ntBASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim42Q9D2H5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim42Q9D2H5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Gm28033-201ENSMUST00000184224 96 ntBASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Gm45098-201ENSMUST00000207179 657 ntBASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Trim42Q9D2H5 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.96□□□□□ -0.17
Trim42Q9D2H5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms