Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.21□□□□□ -0.29
Upk1aQ9D132 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.21□□□□□ -0.29
Upk1aQ9D132 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.21□□□□□ -0.29
Upk1aQ9D132 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Rpph1-201ENSMUST00000175096 319 ntBASIC13.21□□□□□ -0.29
Upk1aQ9D132 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.21□□□□□ -0.29
Upk1aQ9D132 Gm44492-201ENSMUST00000197012 141 ntBASIC13.21□□□□□ -0.29
Upk1aQ9D132 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Upk1aQ9D132 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Upk1aQ9D132 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Upk1aQ9D132 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk1aQ9D132 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk1aQ9D132 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk1aQ9D132 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.21□□□□□ -0.3
Upk1aQ9D132 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Upk1aQ9D132 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Gm1401-201ENSMUST00000122048 772 ntBASIC13.2□□□□□ -0.3
Upk1aQ9D132 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Gm9727-201ENSMUST00000161387 555 ntBASIC13.2□□□□□ -0.3
Upk1aQ9D132 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.2□□□□□ -0.3
Upk1aQ9D132 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.2□□□□□ -0.3
Upk1aQ9D132 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Upk1aQ9D132 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.2□□□□□ -0.3
Upk1aQ9D132 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Upk1aQ9D132 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Upk1aQ9D132 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms