Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Gm13823-201ENSMUST00000119930 345 ntBASIC15.65■□□□□ 0.1
Smc1aQ9CU62 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smc1aQ9CU62 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.64■□□□□ 0.09
Smc1aQ9CU62 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Gm18766-201ENSMUST00000189811 808 ntBASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Gm43767-201ENSMUST00000198933 381 ntBASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smc1aQ9CU62 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Gm38094-201ENSMUST00000195864 2978 ntBASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smc1aQ9CU62 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smc1aQ9CU62 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms