Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim16Q99PP9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.69□□□□□ -0.22
Trim16Q99PP9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trim16Q99PP9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Gm14701-201ENSMUST00000117156 348 ntBASIC13.69□□□□□ -0.22
Trim16Q99PP9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.69□□□□□ -0.22
Trim16Q99PP9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.69□□□□□ -0.22
Trim16Q99PP9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.69□□□□□ -0.22
Trim16Q99PP9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.69□□□□□ -0.22
Trim16Q99PP9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim16Q99PP9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.68□□□□□ -0.22
Trim16Q99PP9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Gm13015-201ENSMUST00000118674 204 ntBASIC13.68□□□□□ -0.22
Trim16Q99PP9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.68□□□□□ -0.22
Trim16Q99PP9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.68□□□□□ -0.22
Trim16Q99PP9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim16Q99PP9 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim16Q99PP9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.67□□□□□ -0.22
Trim16Q99PP9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.67□□□□□ -0.22
Trim16Q99PP9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim16Q99PP9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim16Q99PP9 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim16Q99PP9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim16Q99PP9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim16Q99PP9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim16Q99PP9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim16Q99PP9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim16Q99PP9 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim16Q99PP9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim16Q99PP9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim16Q99PP9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms