Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Gm6736-201ENSMUST00000166583 948 ntBASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Gm38225-201ENSMUST00000194001 393 ntBASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rnf111Q99ML9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Gm43575-201ENSMUST00000196420 516 ntBASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Gm44335-201ENSMUST00000196879 141 ntBASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Gm44297-201ENSMUST00000198304 141 ntBASIC13.55□□□□□ -0.24
Rnf111Q99ML9 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Gm44346-201ENSMUST00000198851 141 ntBASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rnf111Q99ML9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Mir6990-201ENSMUST00000183724 91 ntBASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Gm43125-201ENSMUST00000201724 730 ntBASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Chchd1-203ENSMUST00000224633 557 ntBASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Rnf111Q99ML9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Rnf111Q99ML9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms