Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clp1Q99LI9 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.66□□□□□ -0.06
Clp1Q99LI9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Clp1Q99LI9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.65□□□□□ -0.06
Clp1Q99LI9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Gm22018-201ENSMUST00000104357 131 ntBASIC14.65□□□□□ -0.06
Clp1Q99LI9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Gm12203-201ENSMUST00000118235 598 ntBASIC14.65□□□□□ -0.06
Clp1Q99LI9 Gm12209-201ENSMUST00000120089 596 ntBASIC14.65□□□□□ -0.06
Clp1Q99LI9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.65□□□□□ -0.06
Clp1Q99LI9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.65□□□□□ -0.06
Clp1Q99LI9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.65□□□□□ -0.06
Clp1Q99LI9 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.65□□□□□ -0.06
Clp1Q99LI9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Clp1Q99LI9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.64□□□□□ -0.07
Clp1Q99LI9 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.64□□□□□ -0.07
Clp1Q99LI9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Gm43118-201ENSMUST00000199149 775 ntBASIC14.64□□□□□ -0.07
Clp1Q99LI9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.64□□□□□ -0.07
Clp1Q99LI9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.64□□□□□ -0.07
Clp1Q99LI9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.64□□□□□ -0.07
Clp1Q99LI9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Clp1Q99LI9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Clp1Q99LI9 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Clp1Q99LI9 Gm27501-201ENSMUST00000183599 107 ntBASIC14.63□□□□□ -0.07
Clp1Q99LI9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.63□□□□□ -0.07
Clp1Q99LI9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms