Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cstf1Q99LC2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Gm38671-201ENSMUST00000200573 130 ntBASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Gm19078-201ENSMUST00000206311 727 ntBASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cstf1Q99LC2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Gm15957-201ENSMUST00000118893 974 ntBASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Gm11524-201ENSMUST00000119349 807 ntBASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.92□□□□□ -0.18
Cstf1Q99LC2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Cstf1Q99LC2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cstf1Q99LC2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms