Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lims1Q99JW4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Lims1Q99JW4 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.73□□□□□ -0.37
Lims1Q99JW4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Gm38225-201ENSMUST00000194001 393 ntBASIC12.73□□□□□ -0.37
Lims1Q99JW4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Gm44719-201ENSMUST00000206404 149 ntBASIC12.73□□□□□ -0.37
Lims1Q99JW4 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.73□□□□□ -0.37
Lims1Q99JW4 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.73□□□□□ -0.37
Lims1Q99JW4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lims1Q99JW4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Gm6222-201ENSMUST00000120787 396 ntBASIC12.72□□□□□ -0.37
Lims1Q99JW4 Gm11745-201ENSMUST00000121669 448 ntBASIC12.72□□□□□ -0.37
Lims1Q99JW4 AA543401-201ENSMUST00000164248 1269 ntBASIC12.72□□□□□ -0.37
Lims1Q99JW4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Gm29741-201ENSMUST00000192667 421 ntBASIC12.72□□□□□ -0.37
Lims1Q99JW4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.72□□□□□ -0.37
Lims1Q99JW4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.72□□□□□ -0.37
Lims1Q99JW4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lims1Q99JW4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lims1Q99JW4 Gm23935-201ENSMUST00000102303 57 ntBASIC12.71□□□□□ -0.37
Lims1Q99JW4 Gm24270-201ENSMUST00000102326 57 ntBASIC12.71□□□□□ -0.37
Lims1Q99JW4 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.71□□□□□ -0.37
Lims1Q99JW4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms