Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Pcdhga11Q91XY8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga11Q91XY8 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Gm15957-201ENSMUST00000118893 974 ntBASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Gm15920-201ENSMUST00000118998 402 ntBASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Gm13365-201ENSMUST00000121188 973 ntBASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga11Q91XY8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 AA619741-201ENSMUST00000195095 646 ntBASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Gm44335-201ENSMUST00000196879 141 ntBASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Gm44297-201ENSMUST00000198304 141 ntBASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Gm44346-201ENSMUST00000198851 141 ntBASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga11Q91XY8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms