Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.44□□□□□ -0.1
Trim60Q8VI40 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.44□□□□□ -0.1
Trim60Q8VI40 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 BC001981-202ENSMUST00000191393 1545 ntBASIC14.44□□□□□ -0.1
Trim60Q8VI40 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.44□□□□□ -0.1
Trim60Q8VI40 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim60Q8VI40 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Gm44719-201ENSMUST00000206404 149 ntBASIC14.43□□□□□ -0.1
Trim60Q8VI40 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Gm5867-201ENSMUST00000063197 592 ntBASIC14.43□□□□□ -0.1
Trim60Q8VI40 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim60Q8VI40 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.43□□□□□ -0.1
Trim60Q8VI40 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim60Q8VI40 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Gm13823-201ENSMUST00000119930 345 ntBASIC14.42□□□□□ -0.1
Trim60Q8VI40 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Gm25925-201ENSMUST00000158314 306 ntBASIC14.42□□□□□ -0.1
Trim60Q8VI40 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim60Q8VI40 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.42□□□□□ -0.1
Trim60Q8VI40 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.42□□□□□ -0.1
Trim60Q8VI40 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim60Q8VI40 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.42□□□□□ -0.1
Trim60Q8VI40 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.41□□□□□ -0.1
Trim60Q8VI40 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim60Q8VI40 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms