Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
HnrnpuQ8VEK3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HnrnpuQ8VEK3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HnrnpuQ8VEK3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HnrnpuQ8VEK3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HnrnpuQ8VEK3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HnrnpuQ8VEK3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HnrnpuQ8VEK3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Gm9229-201ENSMUST00000222777 126 ntBASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HnrnpuQ8VEK3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HnrnpuQ8VEK3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Gm46209-201ENSMUST00000217912 553 ntBASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HnrnpuQ8VEK3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Gm15460-201ENSMUST00000118147 391 ntBASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Gm42769-201ENSMUST00000198576 1659 ntBASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HnrnpuQ8VEK3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HnrnpuQ8VEK3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HnrnpuQ8VEK3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HnrnpuQ8VEK3 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HnrnpuQ8VEK3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HnrnpuQ8VEK3 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HnrnpuQ8VEK3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HnrnpuQ8VEK3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC17.37■□□□□ 0.37
HnrnpuQ8VEK3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
HnrnpuQ8VEK3 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms