Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vps4aQ8VEJ9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Gm9385-201ENSMUST00000117563 472 ntBASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Gm37230-201ENSMUST00000194491 818 ntBASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps4aQ8VEJ9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gm5479-201ENSMUST00000160578 435 ntBASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vps4aQ8VEJ9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Vps4aQ8VEJ9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vps4aQ8VEJ9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vps4aQ8VEJ9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Vps4aQ8VEJ9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vps4aQ8VEJ9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vps4aQ8VEJ9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4aQ8VEJ9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vps4aQ8VEJ9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms