Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rpa1Q8VEE4 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Gm2272-201ENSMUST00000194903 582 ntBASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Gm45747-201ENSMUST00000212203 999 ntBASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 AC132260.2-201ENSMUST00000224482 344 ntBASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rpa1Q8VEE4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rpa1Q8VEE4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.08□□□□□ -0.15
Rpa1Q8VEE4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Rpa1Q8VEE4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rpa1Q8VEE4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rpa1Q8VEE4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rpa1Q8VEE4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rpa1Q8VEE4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Gm14716-201ENSMUST00000120138 718 ntBASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Gm18195-201ENSMUST00000207604 706 ntBASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rpa1Q8VEE4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Gm11452-201ENSMUST00000122376 690 ntBASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Gm7230-201ENSMUST00000173026 815 ntBASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Gm5864-201ENSMUST00000202263 970 ntBASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpa1Q8VEE4 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms