Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rtn1Q8K0T0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rtn1Q8K0T0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Gm15487-201ENSMUST00000122373 465 ntBASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Gm20949-201ENSMUST00000206478 952 ntBASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rtn1Q8K0T0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Mir8102-201ENSMUST00000184148 139 ntBASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Gm10766-202ENSMUST00000194123 606 ntBASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Gm44882-201ENSMUST00000205702 802 ntBASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Gm32390-201ENSMUST00000212713 1172 ntBASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rtn1Q8K0T0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Rtn1Q8K0T0 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms