Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Syne4Q8CII8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Efs-202ENSMUST00000227037 2540 ntBASIC15.71■□□□□ 0.11
Syne4Q8CII8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Syne4Q8CII8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Syne4Q8CII8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Gm7783-201ENSMUST00000204795 781 ntBASIC15.71■□□□□ 0.11
Syne4Q8CII8 Gm18056-201ENSMUST00000207670 568 ntBASIC15.71■□□□□ 0.11
Syne4Q8CII8 Gm18061-201ENSMUST00000208350 562 ntBASIC15.71■□□□□ 0.11
Syne4Q8CII8 Gm18063-201ENSMUST00000208529 568 ntBASIC15.71■□□□□ 0.11
Syne4Q8CII8 Gm18052-201ENSMUST00000208750 559 ntBASIC15.71■□□□□ 0.11
Syne4Q8CII8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syne4Q8CII8 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Syne4Q8CII8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Syne4Q8CII8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Syne4Q8CII8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Syne4Q8CII8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Syne4Q8CII8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Gm15236-201ENSMUST00000117309 379 ntBASIC15.7■□□□□ 0.1
Syne4Q8CII8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syne4Q8CII8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Gm4857-201ENSMUST00000192718 785 ntBASIC15.69■□□□□ 0.1
Syne4Q8CII8 Gm42627-201ENSMUST00000197347 224 ntBASIC15.69■□□□□ 0.1
Syne4Q8CII8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.69■□□□□ 0.1
Syne4Q8CII8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syne4Q8CII8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Syne4Q8CII8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms