Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.61□□□□□ -0.23
Rab43Q8CG50 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab43Q8CG50 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.6□□□□□ -0.23
Rab43Q8CG50 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.6□□□□□ -0.23
Rab43Q8CG50 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rab43Q8CG50 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab43Q8CG50 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Efs-202ENSMUST00000227037 2540 ntBASIC13.59□□□□□ -0.23
Rab43Q8CG50 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Mir1982-201ENSMUST00000157368 74 ntBASIC13.59□□□□□ -0.23
Rab43Q8CG50 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Gm2495-201ENSMUST00000191160 466 ntBASIC13.59□□□□□ -0.23
Rab43Q8CG50 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.59□□□□□ -0.23
Rab43Q8CG50 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.59□□□□□ -0.23
Rab43Q8CG50 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.59□□□□□ -0.23
Rab43Q8CG50 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rab43Q8CG50 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Rab43Q8CG50 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rab43Q8CG50 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.58□□□□□ -0.23
Rab43Q8CG50 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rab43Q8CG50 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rab43Q8CG50 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab43Q8CG50 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rab43Q8CG50 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab43Q8CG50 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.58□□□□□ -0.24
Rab43Q8CG50 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab43Q8CG50 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab43Q8CG50 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rab43Q8CG50 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rab43Q8CG50 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rab43Q8CG50 Gm12390-201ENSMUST00000117897 397 ntBASIC13.58□□□□□ -0.24
Rab43Q8CG50 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms