Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Gm2651-201ENSMUST00000203560 838 ntBASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lysmd4Q8CC84 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Gm12350-201ENSMUST00000121208 462 ntBASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Gm17968-201ENSMUST00000194902 784 ntBASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lysmd4Q8CC84 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.5□□□□□ -0.41
Lysmd4Q8CC84 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms