Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Gm19078-201ENSMUST00000206311 727 ntBASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Gm45668-201ENSMUST00000211271 493 ntBASIC16.15■□□□□ 0.18
Shisa4Q8CA71 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Shisa4Q8CA71 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Shisa4Q8CA71 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Shisa4Q8CA71 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Gm12341-201ENSMUST00000119724 503 ntBASIC16.14■□□□□ 0.17
Shisa4Q8CA71 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Gm5354-201ENSMUST00000182417 973 ntBASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Gm18624-201ENSMUST00000220966 658 ntBASIC16.14■□□□□ 0.17
Shisa4Q8CA71 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Shisa4Q8CA71 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Shisa4Q8CA71 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shisa4Q8CA71 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 170.2 ms