Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Alx1Q8C8B0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Gm11524-201ENSMUST00000119349 807 ntBASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Gm26464-201ENSMUST00000157094 305 ntBASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Gm37917-201ENSMUST00000194711 392 ntBASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Gm18624-201ENSMUST00000220966 658 ntBASIC16.25■□□□□ 0.19
Alx1Q8C8B0 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Gm15823-201ENSMUST00000064305 670 ntBASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Gm24447-201ENSMUST00000083977 338 ntBASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Alx1Q8C8B0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Gm15376-201ENSMUST00000122258 783 ntBASIC16.24■□□□□ 0.19
Alx1Q8C8B0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.24■□□□□ 0.19
Alx1Q8C8B0 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.24■□□□□ 0.19
Alx1Q8C8B0 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Alx1Q8C8B0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Gm12341-201ENSMUST00000119724 503 ntBASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Alx1Q8C8B0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Alx1Q8C8B0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms