Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tsen54Q8C2A2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tsen54Q8C2A2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tsen54Q8C2A2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tsen54Q8C2A2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tsen54Q8C2A2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Tsen54Q8C2A2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tsen54Q8C2A2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Tsen54Q8C2A2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.71□□□□□ -0.54
Tsen54Q8C2A2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Gm14140-201ENSMUST00000119999 995 ntBASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Gm5364-201ENSMUST00000216789 889 ntBASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Tsen54Q8C2A2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Gm4899-201ENSMUST00000178708 719 ntBASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 AW822252-206ENSMUST00000208904 237 ntBASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Tsen54Q8C2A2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tsen54Q8C2A2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms