Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.7□□□□□ -0.54
Smim4Q8C1Q6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 AA619741-201ENSMUST00000195095 646 ntBASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Acot6-202ENSMUST00000222921 3622 ntBASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smim4Q8C1Q6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm14494-201ENSMUST00000118786 435 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm29310-201ENSMUST00000185468 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21825-201ENSMUST00000185728 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm29109-201ENSMUST00000185895 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21896-201ENSMUST00000186520 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21873-201ENSMUST00000186728 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21794-201ENSMUST00000187056 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21880-201ENSMUST00000187275 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21826-201ENSMUST00000187451 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21198-201ENSMUST00000188393 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21749-201ENSMUST00000189343 696 ntBASIC11.68□□□□□ -0.54
Smim4Q8C1Q6 Gm21901-201ENSMUST00000189568 696 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms