Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trerf1Q8BXJ2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Gm24158-201ENSMUST00000175263 71 ntBASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Gm7774-201ENSMUST00000200064 533 ntBASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.79□□□□□ -0.04
Trerf1Q8BXJ2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Gm44872-201ENSMUST00000207864 420 ntBASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trerf1Q8BXJ2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trerf1Q8BXJ2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Gm25948-201ENSMUST00000175334 112 ntBASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.77□□□□□ -0.05
Trerf1Q8BXJ2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms