Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smco3Q8BQM7 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Gm14859-201ENSMUST00000117752 357 ntBASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Gm27357-201ENSMUST00000183754 135 ntBASIC11.5□□□□□ -0.57
Smco3Q8BQM7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.5□□□□□ -0.57
Smco3Q8BQM7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Smco3Q8BQM7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.48□□□□□ -0.57
Smco3Q8BQM7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms